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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885113.1_cds_XP_016439063.1_34656
CDS Infomation

[gene=LOC107765007] [db_xref=GeneID:107765007] [protein=serine carboxypeptidase-like 40] [protein_id=XP_016439063.1] [location=complement(join(4312..4488,4566..4671,4789..4881,5129..5244,5794..6054,6311..6585,6694..6801,7539..7914))] [gbkey=CDS]
Sequence

ATGGAAAAAATCACTTTCTTTCTCCTTTTAACCCTCACTCTTTCACAAATTGTTTCTTCA
AGCCTTGACAGGAGCCATAGTCATGGTCTTAGCAAACTTTACTTAACTAAGTTATTGAAA
AAAGATTCAGCCATTGACAAAAATAGCCATTTTAGCTCAGCCCTTGATTATTTAGAATTG
GATAAAGTTGTTCTTCCTCAGGAGGGATTGAAACATAAAGATCGAATCAAGAGATTGTCA
GGTCAACCACCAGTCAAATTCAAACAATATGGTGGATATGTCACAGTCAACGAATTTGTT
GGTCGTGCATTGTTTTATTATTTTGTTGAAGCTGAGAATTCCAGGTCATTGCCCCTGCTT
CTTTGGCTTAATGGAGGTCCTGGTTGCTCTTCAATTGCCTATGGAGCTATGGAGGAACTT
GGACCATTTAGAGTCCACAGTAATGGAAAGACATTGTATAGAAATCACTATGCATGGAAT
CATGAGGCAAACGTATTATTCTTGGAATCCCCAGCTGGAGTAGGATTTTCATATTCAAAT
ACAAGTTCTGACGTCAAATCAAATGGAGATAGAAATACTGCCATTGACAATGTAATATTC
TTATTGAATTGGATCCAGAGGTTCCCAGAGTACAAAAATAGAGATTTTTATATTGCTGGT
GAGAGCTATGCTGGGCATTTTGTACCTCAATTGGCACAAACAATTCTCCACCATAACAAG
CTTGCTAAGAAGACTCTTCTCAACCTAAAGGGGATAATGATTGGCAATGCAGTGATAAAT
TATGAGACTGATAGAAAAGGGATGTATGAGTACCATGCAAGTCATGCCTTGATTCCAGAT
GAGATTTTAGAGCAAATTGAGAGATATTGCAATTTCTCAGACAAGGCCCTTCCTCAATCA
CAAGAGTGCGACAATGCCATTGATATTGCTATAGCTGATACTGAACCCATTGATGTTTAC
AACATTTATGCCCCTTTATGCTCTAATTCCGAACTCACTCTTCAGCCCAAGAAAACTTCA
CAAGTGATCGATCCATGCAGTGATGATTATGTAATTGCCTACATGAATCGTCCCGATGTT
CAAAAGCTTCTCCATGCCAATGTCACCAAAATTAAGTATAATTGGCAGCCATGCAGTGAT
GTCATAGAAAGTTGGACGGATAGCCCATTAACAATAATTCCTCTTCTCAAAGAACTTATG
GCAAATGGAGTACGACTATGGATATTCAGCGGGGACACTGATGGAATCGTACCAGTAACG
TCGACTAAGAAATCTATTAAGAAGATGAAGCTTCCAATTAAAACAGCTTGGTATCCCTGG
TTCCACAATGATGAGGTTGGTGGATATGCACAAATATACGTAGGAAACTTGACATTTGCT
ACAGTGAGAGGAGCAGGACATCAAGTGCCAAGTTATCAGCCTGCTAGAGCTCTTTCACTG
GTTAAGCACTTCCTTGCAGGAACAGAGCTCCCCAATTCACCAAAACACAAAAATAATAAC
GTAGTTATATAA

Peptide Sequence

PEP ID

XP_016439063.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 40 [Nicotiana tabacum]
Sequence

MEKITFFLLLTLTLSQIVSSSLDRSHSHGLSKLYLTKLLKKDSAIDKNSHFSSALDYLEL
DKVVLPQEGLKHKDRIKRLSGQPPVKFKQYGGYVTVNEFVGRALFYYFVEAENSRSLPLL
LWLNGGPGCSSIAYGAMEELGPFRVHSNGKTLYRNHYAWNHEANVLFLESPAGVGFSYSN
TSSDVKSNGDRNTAIDNVIFLLNWIQRFPEYKNRDFYIAGESYAGHFVPQLAQTILHHNK
LAKKTLLNLKGIMIGNAVINYETDRKGMYEYHASHALIPDEILEQIERYCNFSDKALPQS
QECDNAIDIAIADTEPIDVYNIYAPLCSNSELTLQPKKTSQVIDPCSDDYVIAYMNRPDV
QKLLHANVTKIKYNWQPCSDVIESWTDSPLTIIPLLKELMANGVRLWIFSGDTDGIVPVT
STKKSIKKMKLPIKTAWYPWFHNDEVGGYAQIYVGNLTFATVRGAGHQVPSYQPARALSL
VKHFLAGTELPNSPKHKNNNVVI

Transcript Sequence

Gene sequence data has not been registered.